This server prepares a plot showing the profile score for potential calpain cleavage sites along a protein sequence.
Ref.: Tompa P, Buzder-Lantos P, Tantos A, Farkas A, Szilagyi A, Banoczi Z, Hudecz F, Friedrich P: "On the sequential determinants of calpain cleavage". J Biol Chem. 2004 May 14; 279(20):20775-85. [PubMed] [PDF]
Note: In the data output, the first column contains the cleavage site position as a half-integral number (e.g. 10.5 refers to the cleavage site being between residues 10 and 11) and the second column contains the profile score value. Use the "Save As..." feature of your browser to save the data to a plain text (.txt) file (note: some browsers offer the file for downloading without displaying it first in the browser window).
Questions? Contact Andras Szilagyi at szilagyi [dot] andras [at] ttk [dot] mta [dot] hu